Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801712.1_cds_XP_016476775.1_6830
CDS Infomation

[gene=LOC107798313] [db_xref=GeneID:107798313] [protein=polygalacturonase] [protein_id=XP_016476775.1] [location=complement(join(2734..2982,4546..5061,5686..5985,6600..6725))] [gbkey=CDS]
Sequence

ATGGATTTGAAATTCAAGGTACATTTTGCATTGGTGTTGCTATTTCTAGCACACTTTGGG
GAATCTCAAACTGGAGTTTTTGATATAACTAAATATGGTGCTAATAGCAATGCAGATATT
AGTGAGGCATTGTTGAATGCTTTTAAAGAAGCATGTCAATCAACAAGCCCAAGCACAATT
GTGATCCCAAAGGGAACATTTACAATGAATCAAGTAAAACTAGAAGGTCCATGCAAATCC
CCACTTGAACTTCAAATCCAAGCCACTTTGAAAGCTCCTTCAGATCCTAGCCAACTTAAG
GTTGGTGAATGGTTAACTGTAAATAAACTTGATCAGTTTACCATGTCTGGTGGTGGAATT
CTTGATGGTCAAGCTGCAGCTGCTTGGGAATGCAAACAATCCAAAAAATGCAATAAACTT
CCCAATAATTTGAGTTTCAACTCCCTCACAAATTCCACAATCAAGGACATAACAACACTG
GACAGCAAATCATTCCATGTCAACGTTAACCAATGCAAGAATCTAACATTCATTCGATTC
AACGTCAGTGCACCAGCCAACAGCCCAAACACAGATGGAATTCATGTCTCGAGATCGAGC
TCTGTGAATATTACAGATTCAAATTTTTCTACAGGAGATGATTGTATATCAGTTGGTGAT
GAAACAGAACAACTTTATATTACTAGAGTTACATGTGGACCTGGACATGGTATTAGTGTT
GGAAGTCTAGGTGGAAATCCAGATGAAAAACCAGTGGTTGGAGTTTTTGTTAGGAATTGC
ACTTTTACTAACACTGATAATGGTGTTAGAATTAAGACATGGCCTGCTTCACATCCTGGT
GTTGTTAATGATGTTCATTTTGAGGATATTATTGTGCAAAATGTTAGCAATCCTGTTGTC
ATTGATCAAGTTTATTGCCCATTCAACAAATGCAACAAAGATTTGCCATCACAAGTGAAG
ATCAGTAAAGTGAGTTTCCAAAACATAAAGGGAACATCAAGAACTCAAGATGCAGTGTCA
CTTCTCTGCAGTAAAGGTGTACCTTGTGAGGGTATTGAAGTTGGAGACATTGATATAACT
TACAGTGGAAAAGAAGGGCCAGCAAAATCAAGTTGTGAGAATATTAAGCCAAGTTTAAAA
GGCAAACAAAATCCACCTGTTTGTACTGCCTCTGCTGCTTCCTCTTCTTAA

Peptide Sequence

PEP ID

XP_016476775.1
PEP Infomation

PREDICTED: polygalacturonase [Nicotiana tabacum]
Sequence

MDLKFKVHFALVLLFLAHFGESQTGVFDITKYGANSNADISEALLNAFKEACQSTSPSTI
VIPKGTFTMNQVKLEGPCKSPLELQIQATLKAPSDPSQLKVGEWLTVNKLDQFTMSGGGI
LDGQAAAAWECKQSKKCNKLPNNLSFNSLTNSTIKDITTLDSKSFHVNVNQCKNLTFIRF
NVSAPANSPNTDGIHVSRSSSVNITDSNFSTGDDCISVGDETEQLYITRVTCGPGHGISV
GSLGGNPDEKPVVGVFVRNCTFTNTDNGVRIKTWPASHPGVVNDVHFEDIIVQNVSNPVV
IDQVYCPFNKCNKDLPSQVKISKVSFQNIKGTSRTQDAVSLLCSKGVPCEGIEVGDIDIT
YSGKEGPAKSSCENIKPSLKGKQNPPVCTASAASSS

Transcript Sequence

Gene sequence data has not been registered.